Tools & Software
Software
TRamWAy
François Laurent
Software
JolyTree
Alexis Criscuolo
Tool
Cytometry Memory Aid
Sophie Novault
Tool
Cytometry Protocols
Sophie Novault
Tool
Smartphone-Tablets Applications
Sophie Novault
Software
CRISPRCasFinder
Marie Touchon • Eduardo Rocha
Software
PanACoTA: A modular tool for massive microbial comparative genomics
Eduardo Rocha • Amandine Perrin
Software
MGMM : Missingness Aware Gaussian Mixture Models
Hugues Aschard
Software
RAISS
Hugues Aschard
Software
MinActionPath
Marc Delarue
Software
ProteoCombiner
Julia Chamot-Rooke
Software
instaGRAAL: chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder
Romain Koszul
Software
Chromosight: A computer vision program for pattern detection in chromosome contact maps
Romain Koszul
Software
Serpentine: a flexible 2D binning method for differential Hi-C analysis
Romain Koszul
Software
COVID-Align
Software
Imjoy – open access platform for deep learning methods
Christophe Zimmer
Tool
ARIAweb: a server for automated NMR structure calculation
Benjamin Bardiaux
Tool
Python-cwlgen
Hervé Menager
Tool
sequana_coverage standalone application
Thomas Cokelaer
Tool
Single Cell Proteomics
Milena Hasan • Mariette Matondo
Tool
Single Cell Phenotyping – Microscopy
Nathalie Aulner
Tool
Single Cell Phenotyping – Flow Cytometry
Sophie Novault
Tool
Single Cell Data Analysis
Milena Hasan • Marie-Agnès Dillies • Claudia Chica
Tool
Single Cell Transcriptomics, Epigenetic and Genomics (GEX, ATAC, ADT, Multiome)
Marc Monot • Carolina Moraes • Claudia Chica
Tool
crispr.pasteur.fr
David Bikard
Tool
GenEvo
Thomas Bourgeron
Tool
PLUMED-NEST
Max Bonomi
Tool
Live Mouse Tracker
Fabrice de Chaumont • Thomas Bourgeron
Software
g-RITA
Natalia Pietrosemoli
Tool