Timeline

Christophe Becavin
Research Engineer
27 Feb 2023
publication

Yersiniomics, a Multi-Omics Interactive Database for Yersinia Species.

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23 Sep 2020
publication

Bacnet: A user-friendly platform for building multi-omics websites.

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11 Dec 2018
event

C3BI Seminar – An evolutionary perspective on meiotic recombination in vertebrates

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07 Nov 2018
publication

Genome-wide CRISPR-dCas9 screens in E. coli identify essential genes and phage host factors

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28 Sep 2018
software

BACNET : A Java platform to create “multi-omics” website.

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10 Sep 2018
event

[Seminar C3BI]-Integrated and spatial-temporal multiscale modeling of liver guide in vivo experiments in healthy & chronic disease states: a blue print for systems medicine? -by Dirk DRASDO

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03 Sep 2018
event

[Seminar C3BI]-Viral phylodynamic inference: from ancient evolutionary histories to contemporary outbreaks by Philippe Lemey

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10 Aug 2018
event

C3BI Seminars – Signatures of ecological processes in microbial community time series

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19 Jul 2018
course

Introduction to Data Analysis

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19 Jul 2018
course

Introduction to Data Analysis

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28 Mar 2018
event

[C3BI Unit Seminar]

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28 Mar 2018
team

Expertise group: GORE – Genome Organization Regulation and Expression

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15 Mar 2018
event

C3BI Seminar : MixMD: Mapping Protein Surfaces to Discover Druggable Allosteric Sites

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27 Feb 2018
event

C3BI Seminar: Hierarchical functional genomics to interpret genome variation and dissect complex disease architecture

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14 Feb 2018
event

C3BI Seminar: Learning tumor phylogenies from single-cell data

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12 Feb 2018
event

C3BI Seminar – Some lessons learned during 30 years of biocuration activities.

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25 Jan 2018
event

C3BI/Dpt.Bio.Structural Seminar – The structural basis of SMS (Short Motif Sequence), mediated communication between proteins: characterization, modeling and manipulation

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10 Dec 2017
event

C3BI Seminar – Inferring causality in complex molecular pathways from live cell movies

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30 Nov 2017
event

The molecular anatomy of the human body

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13 Nov 2017
event

Genome in 3D: models of chromosome folding

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11 Oct 2017
event

C3BI Seminar – Systems biology seminars

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26 Sep 2017
event

C3BI Seminar – Big data in biology : challenges and opportunities

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11 Sep 2017
event

C3BI Seminar – Computer Vision & Computational Optics for Bioimage Informatics

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30 Aug 2017
event

C3BI Seminar – Linking gene and function by integrated approaches: how to improve the poor annotation status of sequenced genomes

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30 Aug 2017
event

C3BI Seminar – Emergence of de novo protein coding genes from ‘dark genomic matter’ — fact or fiction?

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17 Jul 2017
software

Listeriomics: an Interactive Web Platform for Systems Biology of Listeria

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14 Mar 2017
publication

Listeriomics: an Interactive Web Platform for Systems Biology of Listeria

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13 Feb 2017
publication

N-terminomics identifies Prli42 as a membrane miniprotein conserved in Firmicutes and critical for stressosome activation in Listeria monocytogenes

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19 Jan 2017
publication

Genome-Wide Transcriptional Start Site Mapping and sRNA Identification in the Pathogen Leptospira interrogans

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09 Jan 2017
event

Genetic basis of gene regulation: genome-wide models and applications to diagnosis

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09 Jan 2017
event

Pathogen dynamics through a phylogenetic lens – zooming into the spread of Ebola, Diphtheria, Tuberculosis, Influenza and HIV

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09 Jan 2017
event

[Canceled] Whole cell model and engineering of Mycoplasma pneumoniae as an universal vaccine

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09 Jan 2017
event

Inferring antimicrobial resistance from whole genome sequencing

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09 Jan 2017
event

From bacterial gene expression decomposition to Synthetic Biology

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09 Jan 2017
event

Linking Large-Scale Genomic Rearrangements to 3D Chromatin Structure

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09 Jan 2017
event

RNA-mediated regulation of antibiotics resistance in the human microbiome

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09 Jan 2017
event

Micro- and nano-fluidic technologies for minute DNA sample analysis: application to genomic analysis of cultured cells and circulating DNA

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09 Jan 2017
event

An integrated, structure- and energy-based view of decoding: translation and cellular homeostasys

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09 Jan 2017
event

RNA viruses: characterizing hidden features revealed via comparative genomics

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24 Nov 2015
publication

Evidence of IL-17, IP-10, and IL-10 involvement in multiple-organ dysfunction and IL-17 pathway in acute renal failure associated to Plasmodium falciparum malaria

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26 Jun 2015
team

Bioinformatics and Biostatistics HUB

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16 Apr 2015
publication

Asymptomatic Plasmodium falciparum infection in children is associated with increased auto-antibody production, high IL-10 plasma levels and antibodies to merozoite surface protein 3

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24 Nov 2014
team

Bacteria-Cell Interactions

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25 Mar 2014
publication

Comparison of widely used Listeria monocytogenes strains EGD, 10403S, and EGD-e highlights genomic variations underlying differences in pathogenicity.

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10 Dec 2013
publication

The intestinal microbiota interferes with the microRNA response upon oral Listeria infection

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29 Jul 2013
publication

Specific mutations in H5N1 mainly impact the magnitude and velocity of the host response in mice

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22 Jul 2013
publication

A riboswitch-regulated antisense RNA in Listeria monocytogenes

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01 Jul 2013
publication

Multiparameter single-cell profiling of human CD4+FOXP3+ regulatory T-cell populations in homeostatic conditions and during graft-versus-host disease

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09 Oct 2012
publication

Impact of lactobacilli on orally acquired listeriosis.

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22 May 2012
publication

Comparative transcriptomics of pathogenic and non-pathogenic Listeria species

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07 Feb 2012
publication

The condensed chromatin fiber: an allosteric chemo-mechanical machine for signal transduction and genome processing

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17 Mar 2011
publication

Improving the efficiency of multidimensional scaling in the analysis of high-dimensional data using singular value decomposition

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01 Jan 2011
publication

HMGA1-dependent and independent 7SK RNA gene regulatory activity

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01 Jan 2011
publication

New dimensionality reduction methods for the representation of high dimensional ‘omics’ data

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01 Mar 2010
publication

Transcription within condensed chromatin: Steric hindrance facilitates elongation

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14 Dec 2009
publication

IgG autoantibody to brain beta tubulin III associated with cytokine cluster-II discriminate cerebral malaria in central India

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