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  • team
  • department
  • center
  • program_project
  • nrc
  • whocc
  • project
  • software
  • tool
  • patent
  • Administrative Staff
  • Assistant Professor
  • Associate Professor
  • Clinical Research Assistant
  • Full Professor
  • Graduate Student
  • Lab assistant
  • Non-permanent Researcher
  • Permanent Researcher
  • Pharmacist
  • PhD Student
  • Physician
  • Post-doc
  • Project Manager
  • Research Associate
  • Research Engineer
  • Retired scientist
  • Technician
  • Undergraduate Student
  • Veterinary
  • Visiting Scientist
  • Deputy Director of Center
  • Deputy Director of Department
  • Deputy Director of National Reference Center
  • Deputy Head of Facility
  • Director of Center
  • Director of Department
  • Director of Institute
  • Director of National Reference Center
  • Group Leader
  • Head of Facility
  • Head of Operations
  • Head of Structure
  • Honorary President of the Departement
  • Labex Coordinator
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About

Functional Genomics (FunGen) is a group of research engineers whose objective is to provide support to the C3BI and the Institut Pasteur (IP). FunGen provides IP’s scientific community a high level of expertise in several bioinformatics domains.

We mainly analyse -omics data derived from high throughput sequencing (HTS) projects: from raw sequences to the gene (and protein) function. Our goal is to help scientists disentangle the complex relationship between genotype and phenotype at different scales: from single mutations to complete genomes. Our main areas of expertise include :

  • structural and functional annotation
  • comparative genomics
  • genome fluidity and evolution

In addition to these services and research activities, we are highly involved in several collective tasks, including the development and maintenance of the Hub’s projects management system (BISTRO), and a seminar management tool to disseminate C3BI’s seminar’s information. Finally, we coordinate and actively participate in many of C3BI and IP courses.

Publications

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Courses

This course, organized and tought by FunGen, was designed upon request of the Institut Pasteur to offer a yearly training presenting the main principles of sequence analysis through the use of speciliased web sites. It provides both ground theoretical basis and practical criteria allowing the students to use sequences analysis tools.