-
2019Multiple origins of prokaryotic and eukaryotic single-stranded DNA viruses from bacterial and archaeal plasmids, Nat Commun 2019 Jul;10(1):3425.
-
2019Phage Therapy of Pneumonia Is Not Associated with an Overstimulation of the Inflammatory Response Compared to Antibiotic Treatment in Mice, Antimicrob. Agents Chemother. 2019 Aug;63(8).
-
2019Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes, Nat Microbiol 2019 Nov;4(11):1895-1906.
-
2019Spindle-shaped viruses infect marine ammonia-oxidizing thaumarchaea, Proc. Natl. Acad. Sci. U.S.A. 2019 Jul 30;116(31):15645-15650.
-
2019Origin of programmed cell death from antiviral defense?, Proc. Natl. Acad. Sci. U.S.A. 2019 Aug 13;116(33):16167-16169.
-
2019Changes to virus taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2019), Arch. Virol. 2019 Sep;164(9):2417-2429.
-
2019Origin of viruses: primordial replicators recruiting capsids from hosts, Nat. Rev. Microbiol. 2019 May;17(7):449-458.
-
2019Sequence motifs recognized by the casposon integrase of Aciduliprofundum boonei, Nucleic Acids Res. 2019 Jul 9;47(12):6386-6395.
-
2019Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks, Nat. Biotechnol. 2019 Jun;37(6):632-639.
-
2019Double autoinhibition mechanism of signal transduction ATPases with numerous domains (STAND) with a tetratricopeptide repeat sensor, Nucleic Acids Res. 2019 Apr;47(7):3795-3810.
-
2019Reply to Holmes and Duchêne, “Can Sequence Phylogenies Safely Infer the Origin of the Global Virome?”: Deep Phylogenetic Analysis of RNA Viruses Is Highly Challenging but Not Meaningless, mBio 2019;10(2):e00542-19.
-
2019Additional changes to taxonomy ratified in a special vote by the International Committee on Taxonomy of Viruses (October 2018), Arch. Virol. 2019 Mar;164(3):943-946.
-
2019Integrated mobile genetic elements in Thaumarchaeota, Environ. Microbiol. 2019 Jun;21(6):2056-2078.
-
2019The Battle Within: Interactions of Bacteriophages and Bacteria in the Gastrointestinal Tract, Cell Host Microbe 2019 02;25(2):210-218.
-
2019Classify viruses – the gain is worth the pain, Nature 2019 Feb;566(7744):318-320.
-
2019Minimum Information about an Uncultivated Virus Genome (MIUViG), Nat. Biotechnol. 2019 Jan;37:29-37.
-
2018Strengthening the Interaction of the Virology Community with the International Committee on Taxonomy of Viruses (ICTV) by Linking Virus Names and Their Abbreviations to Virus Species, Syst. Biol. 2019 Sep 1;68(5):828-839.
-
2018ICTV Virus Taxonomy Profile: Tristromaviridae, J. Gen. Virol. 2019 Feb;100(2):135-136.
-
2018Origins and Evolution of the Global RNA Virome, mBio 2018;9(6):e02329-18.
-
2018Centennial celebration of the bacteriophage research, Res. Microbiol. 2018 11;169(9):479-480.
-
2018“I will survive”: A tale of bacteriophage-bacteria coevolution in the gut, Gut Microbes 2019;10(1):92-99.
-
2018ICTV Virus Taxonomy Profile: Globuloviridae, J. Gen. Virol. 2018 Oct;99(10):1357-1358.
-
2018The depths of virus exaptation, Curr Opin Virol 2018 08;31:1-8.
-
2018The Diversity of Bacterial Lifestyles Hampers Bacteriophage Tenacity, Viruses 2018 06;10(6).
-
2018ICTV Virus Taxonomy Profile: Bicaudaviridae, J. Gen. Virol. 2018 07;99(7):864-865.
-
2018Design of a Broad-Range Bacteriophage Cocktail That Reduces Pseudomonas aeruginosa Biofilms and Treats Acute Infections in Two Animal Models, Antimicrob. Agents Chemother. 2018 Jun;62(6).
-
2018Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2018), Arch. Virol. 2018 Sep;163(9):2601-2631.
-
2018Taxonomy of the family Arenaviridae and the order Bunyavirales: update 2018, Arch. Virol. 2018 Aug;163(8):2295-2310.
-
2018Taxonomy of the order Mononegavirales: update 2018, Arch. Virol. 2018 Apr;.
-
2018Pervasive Chimerism in the Replication-Associated Proteins of Uncultured Single-Stranded DNA Viruses, Viruses 2018 Apr;10(4):E187.
-
2018Vast diversity of prokaryotic virus genomes encoding double jelly-roll major capsid proteins uncovered by genomic and metagenomic sequence analysis, Virol. J. 2018 Apr;15(1):67.
-
2018Ortervirales: A new viral order unifying five families of reverse-transcribing viruses, J. Virol. 2018 May 29;92(12): e00515-18.
-
2018ICTV Virus Taxonomy Profile: Plasmaviridae, J. Gen. Virol. 2018 Apr;.
-
2018Smacoviridae: a new family of animal-associated single-stranded DNA viruses, Arch. Virol. 2018 Jul;163(7):2005-2015.
-
2018Novel families of archaeo-eukaryotic primases associated with mobile genetic elements of Bacteria and Archaea, J. Mol. Biol. 2018 Mar; 430(5):737-750.
-
2018ICTV Virus Taxonomy Profile: Ampullaviridae, J. Gen. Virol. 2018 Mar;99(3):288-289.
-
2018ICTV Virus Taxonomy Profile: Guttaviridae, J. Gen. Virol. 2018 Mar;99(3):290-291.
-
2018Nitrosocaldus cavascurensis, an ammonia oxidizing, extremely thermophilic archaeon with a highly mobile genome, Front Microbiol 2018;9:28.
-
2018Taxonomy of prokaryotic viruses: 2017 update from the ICTV Bacterial and Archaeal Viruses Subcommittee, Arch. Virol. 2018 Apr;163(4):1125-1129.
-
2018History of CRISPR-Cas from encounter with a mysterious repeated sequence to genome editing technology, J. Bacteriol. 2018 Mar;200(7):e00580-17.
-
2018Rolling-circle replication initiation protein of haloarchaeal sphaerolipovirus SNJ1 is homologous to bacterial transposases of the IS91 family insertion sequences, J. Gen. Virol. 2018 Mar;99:416-421.
-
2018Bacteriophage GC1, a novel tectivirus infecting Gluconobacter cerinus, an acetic acid bacterium associated with wine-making, Viruses 2018 Jan;10(1):E39.
-
2018Viruses of archaea: Structural, functional, environmental and evolutionary genomics, Virus Res. 2018 Jan;244:181-193.
-
2018Discovery of an expansive bacteriophage family that includes the most abundant viruses from the human gut, Nat Microbiol 2018;3(1):38-46.
-
2017Cellular origin of the viral capsid-like bacterial microcompartments, Biol. Direct 2017 Nov;12(1):25.
-
2017The enigmatic archaeal virosphere, Nat. Rev. Microbiol. 2017 Nov;15(12):724-739.
-
2017Primer-Independent DNA Synthesis by a Family B DNA Polymerase from Self-Replicating Mobile Genetic Elements, Cell Rep 2017 Nov;21(6):1574-1587.
-
2017Polintons, virophages and transpovirons: a tangled web linking viruses, transposons and immunity, Curr Opin Virol 2017 Jun;25:7-15.
-
2017Model for a novel membrane envelope in a filamentous hyperthermophilic virus, eLife 2017 Jun;6:e26268.
-
2017The Lysis of Pathogenic Escherichia coli by Bacteriophages Releases Less Endotoxin Than by β-Lactams, Clin. Infect. Dis. 2017 Jun;64(11):1582-1588.
-
2017Comparative transcriptomics analyses reveal the conservation of an ancestral infectious strategy in two bacteriophage genera, ISME J 2017 May;.
-
2017Casposons: mobile genetic elements that gave rise to the CRISPR-Cas adaptation machinery, Curr. Opin. Microbiol. 2017 May;38:36-43.
-
2017Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2017), Arch. Virol. 2017 Aug;162(8):2505-2538.
-
2017Homologous capsid proteins testify to the common ancestry of retroviruses, caulimoviruses, pseudoviruses and metaviruses, J. Virol. 2017 May 26;91(12):e00210-17.
-
2017Multiple origins of viral capsid proteins from cellular ancestors, Proc. Natl. Acad. Sci. U.S.A. 2017 Mar;114(12):E2401-E2410.
-
2017A network perspective on the virus world, Commun Integr Biol 2017;10(2):e1296614.
-
2017Evolutionary history of ssDNA bacilladnaviruses features horizontal acquisition of the capsid gene from ssRNA nodaviruses, Virology 2017 Feb;504:114-121.
-
2017Sequence-based taxonomic framework for the classification of uncultured single-stranded DNA viruses of the family Genomoviridae, Virus Evol. 2017 Feb; 3(1):vew037.
-
2017Bacteriophages targeting adherent invasive Escherichia coli strains as a promising new treatment for Crohn’s disease, J Crohns Colitis 2017 Jan;.
-
201750 years of the International Committee on Taxonomy of Viruses: progress and prospects, Arch. Virol. 2017 Jan;162(5):1441-1446.
-
2017Consensus statement: Virus taxonomy in the age of metagenomics, Nat. Rev. Microbiol. 2017 Mar;15(3):161-168.
-
2017Possibility and Challenges of Conversion of Current Virus Species Names to Linnaean Binomials, Syst. Biol. 2017 May;66(3):463-473.
-
2017Taxonomy of prokaryotic viruses: 2016 update from the ICTV bacterial and archaeal viruses subcommittee, Arch. Virol. 2017 Apr;162(4):1153-1157.
-
2017Outer Membrane Proteome of Veillonella parvula: A Diderm Firmicute of the Human Microbiome, Frontiers in Microbiology, 2017, 8, pp.article 1215. ⟨10.3389/fmicb.2017.01215⟩.
-
2016Virology: A parasite’s parasite saves host’s neighbours, Nature 2016 Dec;540(7632):204-205.
-
2016Genome-wide analyses of chitin synthases identify horizontal gene transfers towards bacteria and allow a robust and unifying classification into fungi, BMC Evolutionary Biology, 2016, 16, pp.252. ⟨10.1186/s12862-016-0815-9⟩.
-
2016Virus-mediated archaeal hecatomb in the deep seafloor, Sci Adv 2016 Oct;2(10):e1600492.
-
2016Diversity and comparative genomics of chimeric viruses in Sphagnum-dominated peatlands, Virus Evol. 2016; 2(2):vew025..
-
2016Bipartite network analysis of the archaeal virosphere: evolutionary connections between viruses and capsid-less mobile elements, J. Virol. 2016 Nov;90(24):11043-11055.
-
2016The changing view of eukaryogenesis – fossils, cells, lineages and how they all come together, J. Cell. Sci. 2016 Sep;.
-
2016Casposon integration shows strong target site preference and recapitulates protospacer integration by CRISPR-Cas systems, Nucleic Acids Res. 2016 Dec;44(21):10367-10376.
-
2016Eukaryotic-Like Virus Budding in Archaea, mBio 2016 Sep;7(5):e01439-16.
-
2016Phylogenomic analysis supports the ancestral presence of LPS-outer membranes in the Firmicutes., eLife, 2016, 5, pp.e14589. ⟨10.7554/eLife.14589.020⟩.
-
2016Viruses of the Archaea, Encyclopedia of Life Sciences (eLS). John Wiley & Sons, Ltd: Chichester. DOI: 10.1002/9780470015902.a0000774.pub3.
-
2016The Double-Stranded DNA Virosphere as a Modular Hierarchical Network of Gene Sharing, MBio 2016 Aug;7(4):e00978-16.
-
2016Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2016), Arch. Virol. 2016 Oct;161(10):2921-49.
-
2016Genomoviridae: a new family of widespread single-stranded DNA viruses, Arch. Virol. 2016 Sep;161(9):2633-43.
-
2016Fusion of a superfamily 1 helicase and an inactivated DNA polymerase is a signature of common evolutionary history of Polintons, polinton-like viruses, Tlr1 transposons and transpovirons, Virus Evol. 2016; 2(1):vew019.
-
2016The logic of DNA replication in double-stranded DNA viruses: insights from global analysis of viral genomes, Nucleic Acids Res. 2016 Jun;44(10):4551-64.
-
2016Self-synthesizing transposons: unexpected key players in the evolution of viruses and defense systems, Curr. Opin. Microbiol. 2016 Jan;31:25-33.
-
2016Recent mobility of casposons, self-synthesizing transposons at the origin of the CRISPR-Cas immunity, Genome Biol Evol 2016 Jan;8(2):375-386.
-
2016Taxonomy of prokaryotic viruses: update from the ICTV bacterial and archaeal viruses subcommittee, Arch. Virol. 2016 Jan;161(4):1095-9.
-
2016A classification system for virophages and satellite viruses, Arch. Virol. 2016 Jan;161(1):233-47.
-
2016Methanogenesis and the Wood-Ljungdahl Pathway: An Ancient, Versatile, and Fragile Association, Genome Biology and Evolution, 2016, 8 (6), pp.1706-1711. ⟨10.1093/gbe/evw114⟩.
-
2015A novel group of diverse Polinton-like viruses discovered by metagenome analysis, BMC Biol. 2015;13:95.
-
2015Comparative genomics reveals conserved positioning of essential genomic clusters in highly rearranged Thermococcales chromosomes., Biochimie. 2015 Nov;118:313-21. doi: 10.1016/j.biochi.2015.07.008. Epub 2015 Jul 10..
-
2015Evolution of an archaeal virus nucleocapsid protein from the CRISPR-associated Cas4 nuclease, Biol. Direct 2015;10:65.
-
2015Special section on Molecular biology of Archaea, Biochimie 2015 Nov;118:253.
-
2015Sulfolobus Spindle-Shaped Virus 1 Contains Glycosylated Capsid Proteins, a Cellular Chromatin Protein, and Host-Derived Lipids, J. Virol. 2015 Nov;89(22):11681-91.
-
2015The Flagellar Arginine Kinase in Trypanosoma brucei Is Important for Infection in Tsetse Flies, PLoS ONE 2015;10(7):e0133676.
-
2015Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2015), Arch. Virol. 2015 Jul;160(7):1837-50.
-
2015Mysterious hexagonal pyramids on the surface of Pyrobaculum cells, Biochimie 2015 Nov;118:365-367.
-
2015Virology. A virus that infects a hyperthermophile encapsidates A-form DNA, Science 2015 May;348(6237):914-7.
-
2015The two-domain tree of life is linked to a new root for the Archaea, Proc. Natl. Acad. Sci. U.S.A. 2015 May;112(21):6670-5.
-
2015An abyssal mobilome: viruses, plasmids and vesicles from deep-sea hydrothermal vents, Res. Microbiol. 2015 Apr;.
-
2015Multiple layers of chimerism in a single-stranded DNA virus discovered by deep sequencing, Genome Biol Evol 2015 Apr;7(4):993-1001.
-
2015Plant viruses of the Amalgaviridae family evolved via recombination between viruses with double-stranded and negative-strand RNA genomes, Biol. Direct 2015;10:12.
-
2015Membrane vesicles in natural environments: a major challenge in viral ecology, ISME J 2015 Apr;9(4):793-6.
-
2015Origins and evolution of viruses of eukaryotes: The ultimate modularity, Virology 2015 May;479-480:2-25.
-
2015Evolution of adaptive immunity from transposable elements combined with innate immune systems, Nat. Rev. Genet. 2015 Mar;16(3):184-92.
-
2015Evolution of double-stranded DNA viruses of eukaryotes: from bacteriophages to transposons to giant viruses, Ann. N. Y. Acad. Sci. 2015 Apr;1341:10-24.
-
2015Archaeal viruses: living fossils of the ancient virosphere?, Ann. N. Y. Acad. Sci. 2015 Apr;1341:35-40.
-
2015Single-stranded DNA viruses employ a variety of mechanisms for integration into host genomes, Ann. N. Y. Acad. Sci. 2015 Apr;1341:41-53.
-
2015Genomes of planktonic Acidimicrobiales: widening horizons for marine Actinobacteria by metagenomics, MBio 2015;6(1).
-
2015Corrigendum to “unique characteristics of the pyrrolysine system in the 7th order of methanogens: implications for the evolution of a genetic code expansion cassette”, Archaea 2015;2015:941836.
-
2015Polintons: a hotbed of eukaryotic virus, transposon and plasmid evolution, Nat. Rev. Microbiol. 2015 Feb;13(2):105-15.
-
2015Replicating phages in the epidermal mucosa of the eel (Anguilla anguilla), Front Microbiol 2015;6:3.
-
2015Quality and safety requirements for sustainable phage therapy products, Pharm. Res. 2015 Jul;32(7):2173-9.
-
2015S-layers at second glance? Altiarchaeal grappling hooks (hami) resemble archaeal S-layer proteins in structure and sequence, Frontiers in Microbiology, 2015, 9 (6), pp.543. ⟨10.3389/fmicb.2015.00543⟩.
-
2015Toward more accurate ancestral protein genotype-phenotype reconstructions with the use of species tree-aware gene trees, Molecular Biology and Evolution, 2015, 32, pp.13-22. ⟨10.1093/molbev/msu305⟩.
-
2015A movable defense, Scientist, 29(1):46-53.
-
2014Virus evolution toward limited dependence on nonessential functions of the host: the case of bacteriophage SPP1, J. Virol. 2015 Mar;89(5):2875-83.
-
2014Plasmids from Euryarchaeota, Microbiol Spectr 2014 Dec;2(6).
-
2014Biology of a widespread uncultivated archaeon that contributes to carbon fixation in the subsurface., Nat Commun 2014 Nov; 5(): 5497.
-
2014Synergistic template-free synthesis of dsDNA by Thermococcus nautili primase PolpTN2, DNA polymerase PolB, and pTN2 helicase, Extremophiles 2015 Jan;19(1):69-76.
-
2014Key roles for freshwater Actinobacteria revealed by deep metagenomic sequencing, Mol. Ecol. 2014 Dec;23(24):6073-90.
-
2014The TET2 and TET3 aminopeptidases from Pyrococcus horikoshii form a hetero-subunit peptidasome with enhanced peptide destruction properties, Mol. Microbiol. 2014 Nov;94(4):803-14.
-
2014Deciphering the role of the chitin synthase families 1 and 2 in the in vivo and in vitro growth of Aspergillus fumigatus by multiple gene targeting deletion, Cell. Microbiol. 2014 Dec;16(12):1784-805.
-
2014Cellular domains and viral lineages, Trends Microbiol. 2014 Oct;22(10):554-8.
-
2014Comparative genomics highlights the unique biology of Methanomassiliicoccales, a Thermoplasmatales-related seventh order of methanogenic archaea that encodes pyrrolysine, BMC Genomics 2014;15:679.
-
2014Dark matter in archaeal genomes: a rich source of novel mobile elements, defense systems and secretory complexes, Extremophiles 2014 Sep;18(5):877-93.
-
2014Hard out there: understanding archaeal virus biology, Future Virol 9(8):703-706.
-
2014Identification of the minimal replicon and the origin of replication of the crenarchaeal plasmid pRN1, Microbiologyopen 2014 Oct;3(5):688-701.
-
2014Evolution of replicative DNA polymerases in archaea and their contributions to the eukaryotic replication machinery, Front Microbiol 2014;5:354.
-
2014Eukaryotic origins: How and when was the mitochondrion acquired?, Cold Spring Harb Perspect Biol 2014 Dec;6(12):a015990.
-
2014DNA topoisomerase VIII: a novel subfamily of type IIB topoisomerases encoded by free or integrated plasmids in Archaea and Bacteria, Nucleic Acids Res. 2014 Jul;42(13):8578-91.
-
2014Bacterial sensing of bacteriophages in communities: the search for the Rosetta stone, Curr. Opin. Microbiol. 2014 Aug;20:125-30.
-
2014Evolution of eukaryotic single-stranded DNA viruses of the Bidnaviridae family from genes of four other groups of widely different viruses, Sci Rep 2014;4:5347.
-
2014The SF1 helicase encoded by the archaeal plasmid pTN2 of Thermococcus nautili, Extremophiles 2014 Jul;18(4):779-87.
-
2014Unique genome replication mechanism of the archaeal virus AFV1, Mol. Microbiol. 2014 Jun;92(6):1313-25.
-
2014Casposons: a new superfamily of self-synthesizing DNA transposons at the origin of prokaryotic CRISPR-Cas immunity, BMC Biol. 2014;12:36.
-
2014Conservation of major and minor jelly-roll capsid proteins in Polinton (Maverick) transposons suggests that they are bona fide viruses, Biol. Direct 2014;9:6.
-
2014Protein-protein interactions leading to recruitment of the host DNA sliding clamp by the hyperthermophilic Sulfolobus islandicus rod-shaped virus 2, J. Virol. 2014 Jun;88(12):7105-8.
-
2014Extracellular membrane vesicles harbouring viral genomes, Environ Microbiol. 2014 Apr;16(4):1167-75.
-
2014Self-assembly of the general membrane-remodeling protein PVAP into sevenfold virus-associated pyramids, Proc. Natl. Acad. Sci. U.S.A. 2014 Mar;111(10):3829-34.
-
2014Tales from a thousand and one phages, Bacteriophage 2014 Jan;4(1):e28265.
-
2014Evidence for metaviromic islands in marine phages, Front Microbiol 2014;5:27.
-
2014Unique characteristics of the pyrrolysine system in the 7th order of methanogens: implications for the evolution of a genetic code expansion cassette, Archaea 2014;2014:374146.
-
2014A highly divergent archaeo-eukaryotic primase from the Thermococcus nautilus plasmid, pTN2, Nucleic Acids Res. 2014 Apr;42(6):3707-19.
-
2014Gammasphaerolipovirus, a newly proposed bacteriophage genus, unifies viruses of halophilic archaea and thermophilic bacteria within the novel family Sphaerolipoviridae, Arch. Virol. 2014 Jun;159(6):1541-54.
-
2014Comparative analyses of Legionella species identifies genetic features of strains causing Legionnaires’ disease, Genome Biology, 2014, 15 (11), pp.505. ⟨10.1186/s13059-014-0505-0⟩.
-
2014Global phylogenomic analysis disentangles the complex evolutionary history of DNA replication in archaea, Genome Biol Evol 2014 Jan;6(1):192-212.
-
2013[The great virus comeback], Biol Aujourdhui 2013;207(3):153-68.
-
2013[Phagotherapy: a nightmare for bacteria, a dream for physicians?], Biol Aujourdhui 2013;207(3):181-90.
-
2013[Enigmatic archaeal viruses], Biol Aujourdhui 2013;207(3):169-79.
-
2013Expanding the marine virosphere using metagenomics, PLoS Genet. 2013;9(12):e1003987.
-
2013Unification of the globally distributed spindle-shaped viruses of the Archaea, J. Virol. 2014 Feb;88(4):2354-8.
-
2013Assessment of viral community functional potential from viral metagenomes may be hampered by contamination with cellular sequences, Open Biol 2013 Dec;3(12):130160.
-
2013The common ancestor of archaea and eukarya was not an archaeon, Archaea 2013;2013:372396.
-
2013First insights into the entry process of hyperthermophilic archaeal viruses, J. Virol. 2013 Dec;87(24):13379-85.
-
2013Phylogenomic Data Support a Seventh Order of Methylotrophic Methanogens and Provide Insights into the Evolution of Methanogenesis, Genome Biology and Evolution, 2013, 5 (10), pp.1769 - 1780. ⟨10.1093/gbe/evt128⟩.
-
2013The legacy of Carl Woese and Wolfram Zillig: from phylogeny to landmark discoveries, Nat. Rev. Microbiol. 2013 Oct;11(10):713-9.
-
2013Why are there so many diverse replication machineries?, J. Mol. Biol. 2013 Nov;425(23):4714-26.
-
2013A hybrid NRPS-PKS gene cluster related to the bleomycin family of antitumor antibiotics in Alteromonas macleodii strains, PLoS ONE 2013;8(9):e76021.
-
2013Predicting in vivo efficacy of therapeutic bacteriophages used to treat pulmonary infections, Antimicrob. Agents Chemother. 2013 Dec;57(12):5961-8.
-
2013Accelerating expansion of the viral universe, Curr Opin Virol 2013 Oct;3(5):542-5.
-
2013The major role of viruses in cellular evolution: facts and hypotheses, Curr Opin Virol 2013 Oct;3(5):558-65.
-
2013Genome Sequence of “Candidatus Methanomassiliicoccus intestinalis” Issoire-Mx1, a Third Thermoplasmatales-Related Methanogenic Archaeon from Human Feces, Genome Announc 2013;1(4).
-
2013Networks of evolutionary interactions underlying the polyphyletic origin of ssDNA viruses, Curr Opin Virol 2013 Oct;3(5):578-86.
-
2013Enterococcus faecalis prophage dynamics and contributions to pathogenic traits, PLoS Genet. 2013 Jun;9(6):e1003539.
-
2013Massive activation of archaeal defense genes during viral infection, J. Virol. 2013 Aug;87(15):8419-28.
-
2013Genomics and genetics of Sulfolobus islandicus LAL14/1, a model hyperthermophilic archaeon, Open Biol 2013 Apr;3(4):130010.
-
2013Living side by side with a virus: characterization of two novel plasmids from Thermococcus prieurii, a host for the spindle-shaped virus TPV1, Appl. Environ. Microbiol. 2013 Jun;79(12):3822-8.
-
2013Key issues in phage therapy: a report of a dedicated workshop at the Viruses of Microbes II meeting, Res. Microbiol. 2013 Sep;164(7):806-10.
-
2013Characterization of nasal potential difference in cftr knockout and F508del-CFTR mice, PLoS ONE 2013;8(3):e57317.
-
2013A genomic survey of Reb homologs suggests widespread occurrence of R-bodies in proteobacteria, G3 (Bethesda) 2013 Mar;3(3):505-16.
-
2013Genomics and biology of Rudiviruses, a model for the study of virus-host interactions in Archaea, Biochem. Soc. Trans. 2013 Feb;41(1):443-50.
-
2013Insights into dynamics of mobile genetic elements in hyperthermophilic environments from five new Thermococcus plasmids, PLoS ONE 2013;8(1):e49044.
-
2013Solution structure of an archaeal DNA binding protein with an eukaryotic zinc finger fold, PLoS ONE 2013;8(1):e52908.
-
2013The wonderful world of archaeal viruses, Annu. Rev. Microbiol. 2013;67:565-85.
-
2013Chimeric viruses blur the borders between the major groups of eukaryotic single-stranded DNA viruses, Nat Commun 2013;4:2700.
-
2013Metagenomics uncovers a new group of low GC and ultra-small marine Actinobacteria, Sci Rep 2013;3:2471.
-
2013Les virus : leur nature et leur origine, In: A. Saïb (ed) Panorama de la Virologie, Belin, pp 177-196.
-
2012Introduction to special issue on viruses and microbes, Virology 2012 Dec;434(2):137.
-
2012Meeting report of the European Molecular Biology Organization (EMBO) Symposium ‘Viruses of Microbes II’, Brussels, July 2012, Res. Microbiol. 2013 Sep;164(7):799-805.
-
2012Insights into a viral lytic pathway from an archaeal virus-host system, J. Virol. 2013 Feb;87(4):2186-92.
-
2012Genome sequence of “Candidatus Methanomethylophilus alvus” Mx1201, a methanogenic archaeon from the human gut belonging to a seventh order of methanogens, J. Bacteriol. 2012 Dec;194(24):6944-5.
-
2012Reconstruction of novel cyanobacterial siphovirus genomes from Mediterranean metagenomic fosmids, Appl. Environ. Microbiol. 2013 Jan;79(2):688-95.
-
2012The origin of virions and virocells: the Escape hypothesis revisited, In: G. Witzany (ed) Viruses: Essential Agents of Life, Springer Science+Business Media Dordrecht, Netherlands, pp 43-60.
-
2012Fake virus particles generated by fluorescence microscopy, Trends Microbiol. 2013 Jan;21(1):1-5.
-
2012Tools from viruses: bacteriophage successes and beyond, Virology 2012 Dec;434(2):151-61.
-
2012Structure and function of AvtR, a novel transcriptional regulator from a hyperthermophilic archaeal lipothrixvirus, J. Virol. 2013 Jan;87(1):124-36.
-
2012The virocell concept and environmental microbiology, ISME J 2013 Feb;7(2):233-6.
-
2012Darwin’s goldmine is still open: variation and selection run the world, Front Cell Infect Microbiol 2012;2:106.
-
2012Recombination between RNA viruses and plasmids might have played a central role in the origin and evolution of small DNA viruses, Bioessays 2012 Oct;34(10):867-70.
-
2012Archaeal virus with exceptional virion architecture and the largest single-stranded DNA genome, Proc. Natl. Acad. Sci. U.S.A. 2012 Aug;109(33):13386-91.
-
2012Biotransformation of phenylacetonitrile to 2-hydroxyphenylacetic acid by marine fungi, Mar. Biotechnol. 2013 Feb;15(1):97-103.
-
2012Evolution and diversity of the Microviridae viral family through a collection of 81 new complete genomes assembled from virome reads, PLoS ONE 2012;7(7):e40418.
-
2012Prokaryote viruses studied by electron microscopy, Arch. Virol. 2012 Oct;157(10):1843-9.
-
2012Metagenomes of Mediterranean coastal lagoons, Sci Rep 2012;2:490.
-
2012Unexpected and novel putative viruses in the sediments of a deep-dark permanently anoxic freshwater habitat, ISME J 2012 Nov;6(11):2119-27.
-
2012A simple and sensitive method for determining the strand orientation of single-stranded viral genomes, J. Virol. Methods 2012 Oct;185(1):149-51.
-
2012Archaeal tetrathionate hydrolase goes viral: secretion of a sulfur metabolism enzyme in the form of virus-like particles, Appl. Environ. Microbiol. 2012 Aug;78(15):5463-5.
-
2012Time for order in microbial systematics, Trends Microbiol. 2012 May;20(5):209-10.
-
2012Towards a more comprehensive classification of satellite viruses, Nat. Rev. Microbiol. 2012; 10(3):234.
-
2012A new proposed taxon for double-stranded DNA viruses, the order “Ligamenvirales”, Arch. Virol. 2012 Apr;157(4):791-5.
-
2012Postcards from the edge: structural genomics of archaeal viruses, Adv. Virus Res. 2012;82:33-62.
-
2012Polyclonality of concurrent natural populations of Alteromonas macleodii, Genome Biol Evol 2012;4(12):1360-74.
-
2012Sputnik and Mavirus: not more than satellite viruses, Nat. Rev. Microbiol. 2012; 10(1):78.
-
2011Genomics of bacterial and archaeal viruses: dynamics within the prokaryotic virosphere, Microbiol. Mol. Biol. Rev. 2011 Dec;75(4):610-35.
-
2011Spotlight on the Thaumarchaeota, ISME J 2012 Feb;6(2):227-30.
-
2011Taxonomic and functional prokaryote diversity in mildly arsenic-contaminated sediments, Research in Microbiology, 2011, 162 (9), pp.877-887. ⟨10.1016/j.resmic.2011.06.001⟩.
-
2011Virophages or satellite viruses?, Nat. Rev. Microbiol. 2011 Nov;9(11):762-3.
-
2011New abundant microbial groups in aquatic hypersaline environments, Sci Rep 2011;1:135.
-
2011Provirus induction in hyperthermophilic archaea: characterization of Aeropyrum pernix spindle-shaped virus 1 and Aeropyrum pernix ovoid virus 1, J. Bacteriol. 2011 Oct;193(19):5412-9.
-
2011Crenarchaeal CdvA forms double-helical filaments containing DNA and interacts with ESCRT-III-like CdvB, PLoS ONE 2011;6(7):e21921.
-
2011Double-stranded DNA viruses: 20 families and only five different architectural principles for virion assembly, Curr Opin Virol 2011 Aug;1(2):118-24.
-
2011Virology. Revealing virus-host interplay, Science 2011 Jul;333(6038):45-6.
-
2011Characterization of Sulfolobus islandicus rod-shaped virus 2 gp19, a single-strand specific endonuclease, Extremophiles 2011 Sep;15(5):619-24.
-
2011Large-scale phylogenomic analyses indicate a deep origin of primary plastids within cyanobacteria, Mol. Biol. Evol. 2011 Nov;28(11):3019-32.
-
2011The archeoviruses, FEMS Microbiol. Rev. 2011 Nov;35(6):1035-54.
-
2011Phylogeny and evolution of the Archaea: one hundred genomes later, Curr. Opin. Microbiol. 2011 Jun;14(3):274-81.
-
2011Genomic analysis of Acidianus hospitalis W1 a host for studying crenarchaeal virus and plasmid life cycles, Extremophiles 2011 Jul;15(4):487-97.
-
2011Phylogenetic and functional analysis of Aspergillus fumigatus MGTC, a fungal protein homologous to a bacterial virulence factor, Appl. Environ. Microbiol. 2011 Jul;77(13):4700-3.
-
2011Protein conservation in virus evolution, In: Encyclopedia of Life Sciences (eLS). John Wiley & Sons, Ltd: Chichester. DOI: 10.1002/9780470015902.a0023265.
-
2011Microviridae goes temperate: microvirus-related proviruses reside in the genomes of Bacteroidetes, PLoS ONE 2011;6(5):e19893.
-
2011Exceptional virion release mechanism: one more surprise from archaeal viruses, Curr. Opin. Microbiol. 2011 Jun;14(3):315-20.
-
2011Simple and elegant design of a virion egress structure in Archaea, Proc. Natl. Acad. Sci. U.S.A. 2011 Feb;108(8):3354-9.
-
2011Genome analyses of Icelandic strains of Sulfolobus islandicus, model organisms for genetic and virus-host interaction studies, J. Bacteriol. 2011 Apr;193(7):1672-80.
-
2011A thaumarchaeal provirus testifies for an ancient association of tailed viruses with archaea, Biochem. Soc. Trans. 2011 Jan;39(1):82-8.
-
2011An rpoB signature sequence provides unique resolution for the molecular typing of cyanobacteria, International Journal of Systematic and Evolutionary Microbiology, 2011, 61 (1), pp.170-183. ⟨10.1099/ijs.0.019018-0⟩.
-
2010Ribonucleotide reduction – horizontal transfer of a required function spans all three domains, BMC Evol. Biol. 2010;10:383.
-
2010Archaea and the tree of life, Res. Microbiol. 2011 Jan;162(1):1-4.
-
2010The phage therapy paradigm: prêt-à-porter or sur-mesure?, Pharm. Res. 2011 Apr;28(4):934-7.
-
2010A dimeric Rep protein initiates replication of a linear archaeal virus genome: implications for the Rep mechanism and viral replication, J. Virol. 2011 Jan;85(2):925-31.
-
2010Metagenomic analyses of novel viruses and plasmids from a cultured environmental sample of hyperthermophilic neutrophiles, Environ. Microbiol. 2010 Nov;12(11):2918-30.
-
2010A new fusion hypothesis for the origin of Eukarya: better than previous ones, but probably also wrong, Res. Microbiol. 2011 Jan;162(1):77-91.
-
2010On the last common ancestor and early evolution of eukaryotes: reconstructing the history of mitochondrial ribosomes, Res. Microbiol. 2011 Jan;162(1):53-70.
-
2010Evidence for a Xer/dif system for chromosome resolution in archaea, PLoS Genet. 2010 Oct;6(10):e1001166.
-
2010Order to the viral universe, J. Virol. 2010 Dec;84(24):12476-9.
-
2010The origin of eukaryotes and their relationship with the Archaea: are we at a phylogenomic impasse?, Nat. Rev. Microbiol. 2010 Oct;8(10):743-52.
-
2010Diversity of virus-host systems in hypersaline Lake Retba, Senegal., Environmental Microbiology, 2010, 13 (8), epub ahead of print. ⟨10.1111/j.1462-2920.2010.02323.x⟩.
-
2010BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments, BMC Evol. Biol. 2010;10:210.
-
2010Bacteria with a eukaryotic touch: a glimpse of ancient evolution?, Proc. Natl. Acad. Sci. U.S.A. 2010 Jul;107(29):12739-40.
-
2010The evolutionary history of archaeal MCM helicases: a case study of vertical evolution combined with hitchhiking of mobile genetic elements., Molecular Biology and Evolution, 2010, 27 (12), pp.2716-32. ⟨10.1093/molbev/msq161⟩.
-
2010Calcium ion-dependent entry of the membrane-containing bacteriophage PM2 into its Pseudoalteromonas host, Virology 2010 Sep;405(1):120-8.
-
2010Giant viruses: conflicts in revisiting the virus concept, Intervirology 2010;53(5):362-78.
-
2010The Sulfolobus rod-shaped virus 2 encodes a prominent structural component of the unique virion release system in Archaea, Virology 2010 Aug;404(1):1-4.
-
2010Diversity of viruses of the hyperthermophilic archaeal genus Aeropyrum, and isolation of the Aeropyrum pernix bacilliform virus 1, APBV1, the first representative of the family Clavaviridae, Virology 2010 Jul;402(2):347-54.
-
2010Phospholipids act as secondary receptor during the entry of the enveloped, double-stranded RNA bacteriophage phi6, J. Gen. Virol. 2010 Aug;91(Pt 8):2116-20.
-
2010The Scottish Structural Proteomics Facility: targets, methods and outputs, J. Struct. Funct. Genomics 2010 Jun;11(2):167-80.
-
2010Bacteriophages can treat and prevent Pseudomonas aeruginosa lung infections, J. Infect. Dis. 2010 Apr;201(7):1096-104.
-
2010Protein A33 responsible for antibody-resistant spread of Vaccinia virus is homologous to C-type lectin-like proteins, Virus Res. 2010 Jul;151(1):97-101.
-
2010ORF157 from the archaeal virus Acidianus filamentous virus 1 defines a new class of nuclease, J. Virol. 2010 May;84(10):5025-31.
-
2010Familial relationships in hyperthermo- and acidophilic archaeal viruses, J. Virol. 2010 May;84(9):4747-54.
-
2010Comparative analysis of the mosaic genomes of tailed archaeal viruses and proviruses suggests common themes for virion architecture and assembly with tailed viruses of bacteria, J. Mol. Biol. 2010 Mar;397(1):144-60.
-
2010Geographic structuring of the Plasmodium falciparum sarco(endo)plasmic reticulum Ca2+ ATPase (PfSERCA) gene diversity., PLoS ONE, 2010, 5 (2), pp.e9424. ⟨10.1371/journal.pone.0009424⟩.
-
2009Acidianus filamentous virus 1 coat proteins display a helical fold spanning the filamentous archaeal viruses lineage, Proc. Natl. Acad. Sci. U.S.A. 2009 Dec;106(50):21155-60.
-
2009The evolution of histidine biosynthesis in archaea: insights into the his genes structure and organization in LUCA, J. Mol. Evol. 2009 Nov;69(5):512-26.
-
2009Roles of viruses in the environment, Environ. Microbiol. 2009 Nov;11(11):2771-4.
-
2009The great billion-year war between ribosome- and capsid-encoding organisms (cells and viruses) as the major source of evolutionary novelties, Ann. N. Y. Acad. Sci. 2009 Oct;1178:65-77.
-
2009Phylogenomics of sterol synthesis: insights into the origin, evolution, and diversity of a key eukaryotic feature, Genome Biol Evol 2009;1:364-81.
-
2009The crystal structure of ORF14 from Sulfolobus islandicus filamentous virus, Proteins 2009 Sep;76(4):1020-2.
-
2009Evolution of the haem copper oxidases superfamily: a rooting tale, Trends Biochem. Sci. 2009 Aug;34(8):375-81.
-
2009The origin of viruses, Res. Microbiol. 2009 Sep;160(7):466-72.
-
2009Four newly isolated fuselloviruses from extreme geothermal environments reveal unusual morphologies and a possible interviral recombination mechanism, Environ. Microbiol. 2009 Nov;11(11):2849-62.
-
2009Phylogeny of prokaryotes: does it exist and why should we care?, Res. Microbiol. 2009 Sep;160(7):513-21.
-
2009A unique virus release mechanism in the Archaea, Proc. Natl. Acad. Sci. U.S.A. 2009 Jul;106(27):11306-11.
-
2009Structure, function, and targets of the transcriptional regulator SvtR from the hyperthermophilic archaeal virus SIRV1, J. Biol. Chem. 2009 Aug;284(33):22222-37.
-
2009A hidden reservoir of integrative elements is the major source of recently acquired foreign genes and ORFans in archaeal and bacterial genomes, Genome Biol. 2009;10(6):R65.
-
2009Position paper: the creation of a rational scheme for the nomenclature of viruses of Bacteria and Archaea, Environ. Microbiol. 2009 Nov;11(11):2775-7.
-
2009The thermo- and acido-stable ORF-99 from the archaeal virus AFV1, Protein Sci. 2009 Jun;18(6):1316-20.
-
2009Geminiviruses: a tale of a plasmid becoming a virus, BMC Evol. Biol. 2009;9:112.
-
2009A horizontal gene transfer at the origin of phenylpropanoid metabolism: a key adaptation of plants to land, Biol. Direct 2009;4:7.
-
2009Does the evolution of viral polymerases reflect the origin and evolution of viruses?, Nat. Rev. Microbiol. 2009 Mar;7(3):250; author reply 250.
-
2009Happy together: genomic insights into the unique Nanoarchaeum/Ignicoccus association, J. Biol. 2009;8(1):7.
-
2008A DNA topoisomerase IB in Thaumarchaeota testifies for the presence of this enzyme in the last common ancestor of Archaea and Eucarya, Biol. Direct 2008;3:54.
-
2008Virus evolution: how far does the double beta-barrel viral lineage extend?, Nat. Rev. Microbiol. 2008 Dec;6(12):941-8.
-
2008Novel archaeal plasmid pAH1 and its interactions with the lipothrixvirus AFV1, Mol. Microbiol. 2009 Jan;71(1):23-34.
-
2008The multiple evolutionary histories of dioxygen reductases: Implications for the origin and evolution of aerobic respiration, Mol. Biol. Evol. 2009 Feb;26(2):285-97.
-
2008Structural basis of enzyme encapsulation into a bacterial nanocompartment, Nat. Struct. Mol. Biol. 2008 Sep;15(9):939-47.
-
2008Stygiolobus rod-shaped virus and the interplay of crenarchaeal rudiviruses with the CRISPR antiviral system, J. Bacteriol. 2008 Oct;190(20):6837-45.
-
2008Holin of bacteriophage lambda: structural insights into a membrane lesion, Mol. Microbiol. 2008 Aug;69(4):781-3.
-
2008Highly plastic genome of Microcystis aeruginosa PCC 7806, a ubiquitous toxic freshwater cyanobacterium, BMC Genomics 2008;9:274.
-
2008Viruses in acidic geothermal environments of the Kamchatka Peninsula, Res. Microbiol. 2008 Jun;159(5):358-66.
-
2008Identification and functional analysis of the Rz/Rz1-like accessory lysis genes in the membrane-containing bacteriophage PRD1, Mol. Microbiol. 2008 Apr;68(2):492-503.
-
2008Erratum, HFSP J 2008 Apr;2(2):121.
-
2008Archaeal proviruses TKV4 and MVV extend the PRD1-adenovirus lineage to the phylum Euryarchaeota, Virology 2008 May;375(1):292-300.
-
2008Mesophilic Crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota, Nat. Rev. Microbiol. 2008 Mar;6(3):245-52.
-
2008Genetics for Pseudoalteromonas provides tools to manipulate marine bacterial virus PM2, J. Bacteriol. 2008 Feb;190(4):1298-307.
-
2007In a world of microbes, where should microbiology stand?, Res. Microbiol. 2008 Jan-Feb;159(1):74-80.
-
2007Polymyxin B induces lysis of marine pseudoalteromonads, Antimicrob. Agents Chemother. 2007 Nov;51(11):3908-14.
-
2007The origin of modern terrestrial life, HFSP J 2007 Sep;1(3):156-68.
-
2007Putative prophages related to lytic tailless marine dsDNA phage PM2 are widespread in the genomes of aquatic bacteria, BMC Genomics 2007;8:236.
-
2007Phylogenomics of the archaeal flagellum: rare horizontal gene transfer in a unique motility structure, BMC Evol. Biol. 2007;7:106.
-
2007Molecular characterization of African orthobunyaviruses, J. Gen. Virol. 2007 Jun;88(Pt 6):1761-6.
-
2007A novel lysis system in PM2, a lipid-containing marine double-stranded DNA bacteriophage, Mol. Microbiol. 2007 Jun;64(6):1635-48.
-
2007On-line monitoring of changes in host cell physiology during the one-step growth cycle of Bacillus phage Bam35, J. Microbiol. Methods 2007 Apr;69(1):174-9.
-
2007Origin and evolution of DNA topoisomerases, Biochimie 2007 Apr;89(4):427-46.
-
2006Probing the in vivo dynamics of type I protein secretion complex association through sensitivity to detergents, J. Bacteriol. 2007 Mar;189(5):1496-504.
-
2006Viruses of the Archaea: a unifying view, Nat. Rev. Microbiol. 2006 Nov;4(11):837-48.
-
2006Experimental study of phase noise in FBAR resonators, IEEE Trans Ultrason Ferroelectr Freq Control 2006 Nov;53(11):1982-7.
-
2006A novel archaeal regulatory protein, Sta1, activates transcription from viral promoters, Nucleic Acids Res. 2006;34(17):4837-45.
-
2006Genome characterization of lipid-containing marine bacteriophage PM2 by transposon insertion mutagenesis, J. Virol. 2006 Sep;80(18):9270-8.
-
2006The entry mechanism of membrane-containing phage Bam35 infecting Bacillus thuringiensis, J. Bacteriol. 2006 Aug;188(16):5925-34.
-
2006The origin and evolution of Archaea: a state of the art, Philos. Trans. R. Soc. Lond., B, Biol. Sci. 2006 Jun;361(1470):1007-22.
-
2006DNA topoisomerase V: a new fold of mysterious origin, Trends Biotechnol. 2006 Jun;24(6):245-7.
-
2006Structural and genomic properties of the hyperthermophilic archaeal virus ATV with an extracellular stage of the reproductive cycle, J. Mol. Biol. 2006 Jun;359(5):1203-16.
-
2006Evolutionary genomics of archaeal viruses: unique viral genomes in the third domain of life, Virus Res. 2006 Apr;117(1):52-67.
-
2006Three RNA cells for ribosomal lineages and three DNA viruses to replicate their genomes: a hypothesis for the origin of cellular domain, Proc. Natl. Acad. Sci. U.S.A. 2006 Mar;103(10):3669-74.
-
2005A selection for mutants that interfere with folding of Escherichia coli thioredoxin-1 in vivo, Proc. Natl. Acad. Sci. U.S.A. 2005 Dec;102(52):18872-7.
-
2005[Luca: the last universal common ancestor], Med Sci (Paris) 2005 Oct;21(10):860-5.
-
2005Viruses of hyperthermophilic Crenarchaea, Trends Microbiol. 2005 Nov;13(11):535-42.
-
2005Virology: independent virus development outside a host, Nature 2005 Aug;436(7054):1101-2.
-
2005Viral diversity in hot springs of Pozzuoli, Italy, and characterization of a unique archaeal virus, Acidianus bottle-shaped virus, from a new family, the Ampullaviridae, J. Virol. 2005 Aug;79(15):9904-11.
-
2005An emerging phylogenetic core of Archaea: phylogenies of transcription and translation machineries converge following addition of new genome sequences, BMC Evol. Biol. 2005;5:36.
-
2005Structure and genome organization of AFV2, a novel archaeal lipothrixvirus with unusual terminal and core structures, J. Bacteriol. 2005 Jun;187(11):3855-8.
-
2005Nanoarchaea: representatives of a novel archaeal phylum or a fast-evolving euryarchaeal lineage related to Thermococcales?, Genome Biol. 2005;6(5):R42.
-
2005The two ages of the RNA world, and the transition to the DNA world: a story of viruses and cells, Biochimie 2005 Sep-Oct;87(9-10):793-803.
-
2005Penetration of enveloped double-stranded RNA bacteriophages phi13 and phi6 into Pseudomonas syringae cells, J. Virol. 2005 Apr;79(8):5017-26.
-
2004Archaeal phylogeny based on proteins of the transcription and translation machineries: tackling the Methanopyrus kandleri paradox, Genome Biol. 2004;5(3):R17.
-
2003The genome reduction hypothesis and the phylogeny of eukaryotes, Trends Genet. 2003 Dec;19(12):696-700.
-
2003Ligand delivery by haem carrier proteins: the binding of Serratia marcescens haemophore to its outer membrane receptor is mediated by two distinct peptide regions, Mol. Microbiol. 2003 Oct;50(1):77-88.
-
2003Functional divergence prediction from evolutionary analysis: a case study of vertebrate hemoglobin, Mol. Biol. Evol. 2003 Nov;20(11):1754-9.
-
2003Identification, purification, and characterization of an eukaryotic-like phosphopantetheine adenylyltransferase (coenzyme A biosynthetic pathway) in the hyperthermophilic archaeon Pyrococcus abyssi, J. Biol. Chem. 2003 Aug;278(33):31078-87.
-
2003An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi, Mol. Microbiol. 2003 Mar;47(6):1495-512.
-
2002Updating carbamoylphosphate synthase (CPS) phylogenies: occurrence and phylogenetic identity of archaeal CPS genes, J. Mol. Evol. 2002 Aug;55(2):153-60.
-
2002Ancient phylogenetic relationships, Theor Popul Biol 2002 Jun;61(4):391-408.
-
2000Phylogenetic depth of the bacterial genera Aquifex and Thermotoga inferred from analysis of ribosomal protein, elongation factor, and RNA polymerase subunit sequences, J. Mol. Evol. 2000 Apr;50(4):366-80.
-
1999Discontinuous occurrence of the hsp70 (dnaK) gene among Archaea and sequence features of HSP70 suggest a novel outlook on phylogenies inferred from this protein, J. Bacteriol. 1999 Jan;181(2):434-43.
-
1998The root of the universal tree of life inferred from anciently duplicated genes encoding components of the protein-targeting machinery, J. Mol. Evol. 1998 Nov;47(5):508-16.
-
1997Rapid identification by specific PCR of coagulase-negative staphylococcal species important in hospital infection, J. Med. Microbiol. 1997 Jan;46(1):45-53.
-
1996Study of a melanic pigment of Proteus mirabilis, Res. Microbiol. 1996 Mar-Apr;147(3):167-74.
-
1986Declining anemia prevalence among children enrolled in public nutrition and health programs–selected states, 1975-1985, MMWR Morb. Mortal. Wkly. Rep. 1986 Sep;35(36):565-6.