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  • team
  • department
  • center
  • program_project
  • nrc
  • whocc
  • project
  • software
  • tool
  • patent
  • Administrative Staff
  • Assistant Professor
  • Associate Professor
  • Clinical Research Assistant
  • Full Professor
  • Graduate Student
  • Lab assistant
  • Non-permanent Researcher
  • Permanent Researcher
  • Pharmacist
  • PhD Student
  • Physician
  • Post-doc
  • Project Manager
  • Research Associate
  • Research Engineer
  • Retired scientist
  • Technician
  • Undergraduate Student
  • Veterinary
  • Visiting Scientist
  • Deputy Director of Center
  • Deputy Director of Department
  • Deputy Director of National Reference Center
  • Deputy Head of Facility
  • Director of Center
  • Director of Department
  • Director of Institute
  • Director of National Reference Center
  • Group Leader
  • Head of Facility
  • Head of Operations
  • Head of Structure
  • Honorary President of the Departement
  • Labex Coordinator
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© Research
Scientific Fields
Diseases
Organisms
Applications
Technique
Starting Date
06
Feb 2015
Ending Date
01
May 2030
Status
Ongoing
Members
3

About

The Whole-Exome Sequencing is carried out on the HiSeq2500 within 4 to 5 days. The commercial capture kits of exonic regions are regularly improved. The Nextera Rapid Capture Expanded Exome delivers 62 Mb of genomic content, including exons, untranslated regions (UTRs), and miRNA and requires only 50 ng of DNA. A pipeline, based on the Genome Analysis Toolkit (GATK) developed at the Broad Institute, is available for the analysis of batches of WES data. It runs on the internal cluster BIC (today, 100 Compute nodes). CNV analysis is also done.