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Sonia Soledad Mondino

© Marie-Christine Prévost, Anne Derbise

Bactéries Yersinia pestis en microscopie electronique à balayage.

Member: Deputy Director of National Reference Center

Cyril Savin

• Yersinia

Laboratory: Yersinia

Plague and Yersinioses [Reference Center]

PM

Scientific Fields

Diseases

Organisms

Applications

Technique

Scientific Fields

Bacteriology
Epidemiology and public health
Evolution
Genetics, Genomics
Genomics
Microbiology and Infection

Diseases

Bacterial diseases
Plague
Zoonosis

Organisms & Organs

Bacteria
Yersinia
Yersinia enterocolitica
Yersinia pestis
Yersinia pseudotuberculosis

Application

Diagnostic tools

Technique

2D Electrophoresis
Bioinformatics Data Analysis a
Data management
Database
Genome analysis
Illumina HiSeq
Illumina NextSeq
Molecular Biology/Sequencing/
PCR
Sequence analysis
Sequencing
SNP and CNV genotyping assays
Whole genome sequencing

Click to view graph

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20 Publications

Projects

Genomic taxonomy of bacterial strains: universal nomenclatures for epidemiology and population biology

Sylvain Brisse (PI)

High-throughput sequencing has revolutionized our abilities to track and characterize novel bacterial strains as they emerge and disseminate globally. Genome-based epidemiological typing systems provide ultimate resolution for strain discrimination. Genome sequences may also be […]

Software

BIGSdb-Pasteur

Sylvain Brisse (PI)

BIGSdb-Pasteur is the genomic-based strain taxonomy and nomenclature platform of Institut Pasteur, powered by the BIGSdb software developed at Oxford University. This web platform hosts collections of curated, open or private databases of bacterial […]

Publications

Download

2023

Lê-Bury P, Druart K, Savin C, Lechat P, Mas Fiol G, Matondo M, Bécavin C, Dussurget O, Pizarro-Cerdá J, Yersiniomics, a Multi-Omics Interactive Database for Yersinia Species., Microbiol Spectr 2023 Feb; (): e0382622.
2022

Savin C, Le Guern AS, Chereau F, Guglielmini J, Heuzé G, Demeure C, Pizarro-Cerdá J, , First Description of a Yersinia pseudotuberculosis Clonal Outbreak in France, Confirmed Using a New Core Genome Multilocus Sequence Typing Method., Microbiol Spectr 2022 Jul; (): e0114522.
2022

Demeure C, Dussurget O, Fiol GM, Le Guern AS, Savin C, Pizarro-Cerdá J, , Yersinia pestis and plague: an updated view on evolution, virulence determinants, immune subversion, vaccination and diagnostics., Microbes Infect 2019 ; 21(5-6): 202-212.
2020

Le Guern AS, Savin C, Angermeier H, Brémont S, Clermont D, Mühle E, Orozova P, Najdenski H, Pizarro-Cerdá J, , Yersinia artesiana sp. nov., Yersinia proxima sp. nov., Yersinia alsatica sp. nov., Yersina vastinensis sp. nov., Yersinia thracica sp. nov. and Yersinia occitanica sp. nov., isolated from humans and animals., Int J Syst Evol Microbiol 2020 Oct; 70(10): 5363-5372.
2020

Wallet F, Le Guern AS, Penven M, Senneville E, Savin C, Loïez C, , Yersinia enterocolitica biotype 1B case report: an unusual pathogen in an osteoarticular infection on device., BMC Infect. Dis. 2020 Jul; 20(1): 498.
2019

Savin C, Criscuolo A, Guglielmini J, Le Guern AS, Carniel E, Pizarro-Cerdá J, Brisse S, Genus-wide Yersinia core-genome multilocus sequence typing for species identification and strain characterization, Microb Genom 2019 Oct;.
2019

Demeure CE, Dussurget O, Mas Fiol G, Le Guern AS, Savin C, Pizarro-Cerdá J, , Yersinia pestis and plague: an updated view on evolution, virulence determinants, immune subversion, vaccination, and diagnostics., Genes Immun 2019 May; 20(5): 357-370.
2018

Le Guern AS, Savin C, Brémont S, Payro G, Bon D, Carniel E, Pizarro-Cerdá J, First isolation of Yersinia entomophaga in human urinary tract, New Microbes New Infect 2018 Nov;26:3-7.
2018

Savin C, Le Guern AS, Lefranc M, Brémont S, Carniel E, Pizarro-Cerdá J, Isolation of a Yersinia enterocolitica biotype 1B strain in France, and evaluation of its genetic relatedness to other European and North American biotype 1B strains, Emerg Microbes Infect 2018 Jul;7(1):121.
2018

Bonardi S, Le Guern AS, Savin C, Pupillo G, Bolzoni L, Cavalca M, Pongolini S, Detection, virulence and antimicrobial resistance of Yersinia enterocolitica in bulk tank milk in Italy, International Dairy Journal 84 (2018) 46-53.
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View full list of publications

Published on: 11 May 2015 • Modified on: 22 Sep 2020

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